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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929857.1_cds_XP_016477067.1_68838
CDS Infomation

[gene=LOC107798568] [db_xref=GeneID:107798568] [protein=hydroxymethylglutaryl-CoA synthase-like] [protein_id=XP_016477067.1] [location=complement(join(202432..202620,202790..202939,203039..203179,203334..203421,203512..203567,203663..203738,203828..203901,204426..204584,204863..205006,205493..205687))] [gbkey=CDS]
Sequence

ATGACCTTTTGGGTCATCACATGGTATTGCATAATTATTCTAATTATATTGTTTGTCTTC
AGTTTGACAGCTGTTAATTCCCTTCTGGAGAAGTATGCTGTTGATCCAAAGCAAGTTGGT
AGACTGGAAGTTGGAAGTGAGACTGTTATCGATAAAAGCAAATCCATCAAGACGTTCCTG
ATGCAAATATTTGAGAAATGTGGGAATACTGACATTGAAGGAGTTGACTCAACTAATGCA
TGCTATGGTGGAACTGCTGCATTGTTCAACTGTGTGAATTGGGTGGAGAGCTCTTCATGG
GATGGACGTTATGGACTTGTTGTATGCACAGATAGTGCGGTCTATGCTGAAGGACCTGCT
AGGCCAACTGGAGGAGCTGCTGCCATTGCTATGCTAATTGGGCCTAATGCCCCTATTGTT
TTTGAAAGCAAGATCAGGGCTAGCCATATGGCTCATGTCTATGATTTTTACAAGCCTATC
CTAGACAGTGAATATCCAGTGGTTGATGGCAAGCTTTCACAAACTTGTTATCTCATGGCA
CTTGATGCTTGCTACAAGAGCTTATGCAACAAATATGAGAAATTGGAAGGCAAGCAGTTT
TCGATTGCTGATGCAGCCTACTTTGTGTTCCATTCACCGTACAACAAGCTTGTACAAAAG
AGCTTTGCTCGGTTGCTTTTCAATGACTTTTTGAGGAATGCTTGCTCTATCGATAAATCT
GCCAAAGAAAAGCTTGCACCATTTTTGTCCCTAAGTGGTGATGAAAGCTACCAAAGCCGT
GATCTTGAGAAGACATCCCAGCAAGTTGCAAAACCATTTTACAATGAGAAGGTGCAACCT
ACCACATTAATACCAAAACAAGTTGGCAACATGTACACTGCTTCTCTATATGCTGCTTTT
GCATCACTCCTTCACAATAAGCACAACACGTTGGCTGGACAGCGGGTAATGTTGTTCTCC
TATGGTAGTGGATCAACTGCAACAATGTTCTCACTCAAGCTTAATGAAGGTCAACATCCT
TTTAGCTTGTCAAACATTGCAAGCGCGATGAATGTTGCAGAGAAGTTGAAATCAAGACAC
GAGTTGGTTCCTGAAAAATTCGTCGAAATAATGCAACTAATGGAGCATAGATATGGGGCC
AAGGATTTCGTCACAAGCAAAGATTGTAGTCTTCTAGCTCCAGGAACTTACTACCTCACA
GAGGTTGATTCCAAGTACAGAAGATTCTATGCCAAGAAAGCTTCTGAGAATGGACTGGTG
AATGGTCACTGA

Peptide Sequence

PEP ID

XP_016477067.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Nicotiana tabacum]
Sequence

MTFWVITWYCIIILIILFVFSLTAVNSLLEKYAVDPKQVGRLEVGSETVIDKSKSIKTFL
MQIFEKCGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA
RPTGGAAAIAMLIGPNAPIVFESKIRASHMAHVYDFYKPILDSEYPVVDGKLSQTCYLMA
LDACYKSLCNKYEKLEGKQFSIADAAYFVFHSPYNKLVQKSFARLLFNDFLRNACSIDKS
AKEKLAPFLSLSGDESYQSRDLEKTSQQVAKPFYNEKVQPTTLIPKQVGNMYTASLYAAF
ASLLHNKHNTLAGQRVMLFSYGSGSTATMFSLKLNEGQHPFSLSNIASAMNVAEKLKSRH
ELVPEKFVEIMQLMEHRYGAKDFVTSKDCSLLAPGTYYLTEVDSKYRRFYAKKASENGLV
NGH

Transcript Sequence

Gene sequence data has not been registered.